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2004
Amat, M
,
Perez M
,
Llor N
,
Escolano C
,
Luque FJ
,
Molins E
,
Bosch J
. 2004.
Conjugate additions to phenylglycinol-derived unsaturated delta-lactams. Enantioselective synthesis of uleine alkaloids
.
The Journal of organic chemistry. 69(25):8681-8693.
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2005
Soteras, I
,
Curutchet C
,
Bidon-Chanal A
,
Orozco M
,
Luque FJ
. 2005.
Extension of the MST model to the IEF formalism: HF and B3LYP parametrizations
.
Journal of Molecular Structure-Theochem. 727(1-3):29-40.
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Curutchet, C
,
Bidon-Chanal A
,
Soteras I
,
Orozco M
,
Luque FJ
. 2005.
MST continuum study of the hydration free energies of monovalent ionic species
.
Journal of Physical Chemistry B. 109(8):3565-3574.
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Curutchet, C
,
Mennucci B
. 2005.
Toward a molecular scale interpretation of excitation energy transfer in solvated bichromophoric systems
.
Journal of the American Chemical Society. 127(47):16733-16744.
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Morreale, A
,
de la Cruz X
,
Meyer T
,
Gelpi JL
,
Luque FJ
,
Orozco M
. 2005.
Partition of protein solvation into group contributions from molecular dynamics simulations
.
Proteins. 58(1):101-109.
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Crespo, A
,
Marti MA
,
Kalko SG
,
Morreale A
,
Orozco M
,
Gelpi JL
,
Luque FJ
,
Estrin DA
. 2005.
Theoretical study of the truncated hemoglobin HbN: exploring the molecular basis of the NO detoxification mechanism
.
Journal of the American Chemical Society. 127(12):4433-4444.
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Noy, A
,
Perez A
,
Marquez M
,
Luque FJ
,
Orozco M
. 2005.
Structure, recognition properties, and flexibility of the DNA.RNA hybrid
.
Journal of the American Chemical Society. 127(13):4910-4920.
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Munoz-Muriedas, J
,
Perspicace S
,
Bech N
,
Guccione S
,
Orozco M
,
Luque FJ
. 2005.
Hydrophobic molecular similarity from MST fractional contributions to the octanol/water partition coefficient
.
Journal of computer-aided molecular design. 19(6):401-419.
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Dymock, BW
,
Barril X
,
Brough PA
,
Cansfield JE
,
Massey A
,
McDonald E
,
Hubbard RE
,
Surgenor A
,
Roughley SD
,
Webb P
et al.
. 2005.
Novel, potent small-molecule inhibitors of the molecular chaperone Hsp90 discovered through structure-based design
.
Journal of medicinal chemistry. 48(13):4212-4215.
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Barril, X
,
Morley SD
. 2005.
Unveiling the full potential of flexible receptor docking using multiple crystallographic structures
.
Journal of medicinal chemistry. 48(13):4432-4443.
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Perez, A
,
Sponer J
,
Jurecka P
,
Hobza P
,
Luque FJ
,
Orozco M
. 2005.
Are the hydrogen bonds of RNA (AU) stronger than those of DNA (AT)? A quantum mechanics study
Chemistry (Weinheim an der Bergstrasse, Germany). 11(17):5062-5066.
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Rueda, M
,
Luque FJ
,
Orozco M
. 2005.
Nature of minor-groove binders-DNA complexes in the gas phase
.
Journal of the American Chemical Society. 127(33):11690-11698.
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Marco, E
,
Negri A
,
Luque FJ
,
Gago F
. 2005.
Role of stacking interactions in the binding sequence preferences of DNA bis-intercalators: insight from thermodynamic integration free energy simulations
.
Nucleic acids research. 33(19):6214-6224.
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Martinez, A
,
Alonso M
,
Castro A
,
Dorronsoro I
,
Gelpi JL
,
Luque FJ
,
Perez C
,
Moreno FJ
. 2005.
SAR and 3D-QSAR studies on thiadiazolidinone derivatives: exploration of structural requirements for glycogen synthase kinase 3 inhibitors
.
Journal of medicinal chemistry. 48(23):7103-7112.
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Munoz-Ruiz, P
,
Rubio L
,
Garcia-Palomero E
,
Dorronsoro I
,
del Monte-Millan M
,
Valenzuela R
,
Usan P
,
de Austria C
,
Bartolini M
,
Andrisano V
et al.
. 2005.
Design, synthesis, and biological evaluation of dual binding site acetylcholinesterase inhibitors: new disease-modifying agents for Alzheimer's disease
.
Journal of medicinal chemistry. 48(23):7223-7233.
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Brough, PA
,
Barril X
,
Beswick M
,
Dymock BW
,
Drysdale MJ
,
Wright L
,
Grant K
,
Massey A
,
Surgenor A
,
Workman P
. 2005.
3-(5-Chloro-2,4-dihydroxyphenyl)-pyrazole-4-carboxamides as inhibitors of the Hsp90 molecular chaperone
.
Bioorganic & medicinal chemistry letters. 15(23):5197-5201.
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Barril, X
,
Brough P
,
Drysdale M
,
Hubbard RE
,
Massey A
,
Surgenor A
,
Wright L
. 2005.
Structure-based discovery of a new class of Hsp90 inhibitors
.
Bioorganic & medicinal chemistry letters. 15(23):5187-5191.
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Alonso, D
,
Dorronsoro I
,
Rubio L
,
Munoz P
,
Garcia-Palomero E
,
Monte DM
,
Bidon-Chanal A
,
Orozco M
,
Luque FJ
,
Castro A
et al.
. 2005.
Donepezil-tacrine hybrid related derivatives as new dual binding site inhibitors of AChE
.
Bioorganic & medicinal chemistry. 13(24):6588-6597.
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2006
Curutchet, C
,
Cammi R
,
Mennucci B
,
Corni S
. 2006.
Self-consistent quantum mechanical model for the description of excitation energy transfers in molecules at interfaces
.
Journal of Chemical Physics. 125(5)
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Camps, P
,
Gomez E
,
Munoz-Torrero D
,
Badia A
,
Clos M V
,
Curutchet C
,
Munoz-Muriedas J
,
Luque FJ
. 2006.
Binding of 13-amidohuprines to acetylcholinesterase: Exploring the ligand-induced conformational change of the Gly117-Gly118 peptide bond in the oxyanion hole
.
Journal of Medicinal Chemistry. 49(23):6833-6840.
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Curutchet, C
,
Orozco M
,
Luque FJ
,
Mennucci B
,
Tomasi J
. 2006.
Dispersion and repulsion contributions to the solvation free energy: Comparison of quantum mechanical and classical approaches in the polarizable continuum model
.
Journal of Computational Chemistry. 27(15):1769-1780.
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Huertas, O
,
Blas JR
,
Soteras I
,
Orozco M
,
Luque FJ
. 2006.
Benzoderivatives of nucleic acid bases as modified DNA building blocks
.
The journal of physical chemistry.A. 110(2):510-518.
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Noy, A
,
Meyer T
,
Rueda M
,
Ferrer C
,
Valencia A
,
Perez A
,
de la Cruz X
,
Lopez-Bes JM
,
Pouplana R
,
Fernandez-Recio J
et al.
. 2006.
Data mining of molecular dynamics trajectories of nucleic acids
.
Journal of Biomolecular Structure & Dynamics. 23(4):447-456.
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Cubero, E
,
Luque FJ
,
Orozco M
. 2006.
Theoretical study of the Hoogsteen-Watson-Crick junctions in DNA
.
Biophysical journal. 90(3):1000-1008.
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Howes, R
,
Barril X
,
Dymock BW
,
Grant K
,
Northfield CJ
,
Robertson AG
,
Surgenor A
,
Wayne J
,
Wright L
,
James K
et al.
. 2006.
A fluorescence polarization assay for inhibitors of Hsp90
.
Analytical Biochemistry. 350(2):202-213.
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