Atomistic and Multiscale Computational Modelling in Physics, Chemistry and Biochemistry
Skills and competences
- Skills to deliver scientific presentations orally and in written form in the three languages used in the master's degree.
- Capacity to consult and understand information from scientific literature and databases, and to analyse scientific and technical documents in English.
- Ability to work in a coordinated manner in the preparation and development of a project.
- Capacity to apply the acquired knowledge to problem-solving in new or relatively unknown environments.
- Capacity for analysis, synthesis, global perspectives, and the application of knowledge to practical cases.
- Ability to work in IT environments associated with the supercomputing employed in applications for atomistic and multiscale modelling.
- Capacity to write in high-level programming languages and understand the basic concepts of parallelization and optimization of programs.
- Capacity to write scripts to perform complex tasks involving different programs and operating system commands.
- Understanding of the mathematical bases of the most common modelling methods and their computational numerical implementation.
- Understanding of the different length and time scales in nature and the physico-mathematical formalism applied in each of them.
- Understanding of the physical laws that govern the behaviour of physico-chemical systems relevant to balance (solids, fluids, solutions, surfaces, interfaces, macromolecules, colloids, biopolymers, nanoparticles, etc.) in conditions of balance.
- Understanding of the physical laws that govern the behaviour of systems out of balance (relaxation processes, transport phenomena, chemical reactivity, reaction-diffusion processes, phase changes in physico-chemical and biochemical systems, metabolic processes, signal transduction, etc.)
- Capacity to evaluate and select the length and time scales in which a phenomenon occurs, given a material, physical or chemical phenomenon or complex system to be modelled.
- Capacity to evaluate and select the best simulation and modelling techniques to describe a phenomenon in terms of its spatial and temporal scale, given a particular material, physical or chemical phenomenon or complex system to be modelled.
- Understanding of the limits of computational implementation for each methodology studied, and the ability to discern the most appropriate approach for each real case study.
- Capacity to use different software packages to study the electronic structure of molecules and solids, as well as their transport properties and chemical reactivity.
- Capacity to use different software packages to study the structure and properties of solids, fluids, solutions, macromolecules, biopolymers, surfaces, nanoparticles, interfaces and colloids.
- Capacity to use the different software packages available that allow the application of different standard molecular modelling techniques.
- Understanding of the concepts behind simulation techniques based on force fields and multiscale simulation techniques based on coarse-graining models.
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