Carolina Estarellas
I am Associate Professor at the University of Barcelona (UB). Previously, I carried out my PhD in Chemical Science and Technology at the University of Balearic Islands, studying the cooperativity effects between different noncovalent interactions, particularly anion-pi interactions, by means of computational and experimental studies. In 2012, I joined the group of Prof. J. Sponer (U. Masaryk at Czech Republic), starting my post-doctoral period. I gained in-depth knowledge in MD simulations to study protein-RNA systems. In 2013, I joined the group of Prof. Luque (UB) as Juan de la Cierva researcher. I reinforced my background on MD simulations studying protein-ligand complexes. I also applied my QM background in the study of multicomponent chemical reactions. In 2018, I joined Prof. Gervasio’s group, first as a Marie Curie fellow at UCL (London, UK), and then as Suppléante collaboratrice scientifique II in the U. Geneva, where I developed novel metadynamics methods and studied cryptic pockets in proteins. In 2021, I joined the University of Barcelona as Lecturer Professor, where I started to develop my current research lines.
My current research is focused on the understanding of structure-activity relationships (SAR) and how the conformational dynamics of the biomacromolecular systems affect this SAR by using computational methods. Our targets are mainly related to cardiometabolic diseases where the folding and aggregation processes, allosteric network communication and reactivity mechanisms are key components of our projects.
Additionally, I actively participate in outcome activities like the Science Days, Teaching Room, and Open Doors days, and I have collaborated in know-how transfer projects with Repsol YPF to predict molecules that could potentiate fuels. From July 2022 I am scientific advisor of Pharmacelera, a company devoted to developing computational software for early stages of Drug Discovery pipelines.
Since Feb 2021, I am coordinator of courses in Physics and Physicochemistry, Bioinformatics and Molecular Modeling and Separation and Identification Techniques at UB. I am also teaching Drug Design subjects in the Masters of Biomedicine (UB) and Chemical Innovation and Regulation Erasmus Mundus Master.
Master Students
- Ikenna Calvin Ugwoke
- Marc Escolà
- Marcelo A. Guzmán
Undergraduate Students
- Jiayu Jin
- Carla March
Former Students
PostDocs
- Rhys A. Evans, PhD.
PHD Thesis
- Elnaz Aledavood, PhD Thesis, Exploring Molecular Mechanisms of Key Targets in Metabolic and Infectious Diseases, October 2021
MS Thesis
- Nureni Ipinloju, Unraveling the mechanism of choline cleavage: a pathway toward designing potential inhibitors for cardiovascular disease treatment – QM study, September 2025
- Ana Palomares, Fine-tuning the dysbiotic human gut microbiota through the CutC:CutD enzymatic complex: Towards the design of bRo5, July 2025
- Adrinê Tcharkhetian, Towards the generation of full AMPK model: combining experimental and computational techniques, September 2024
- Mariam AbraAbramishvili, Effects of leptin-derived peptides on β-amyloid folding patterns and aggregation inhibition,September 2024
- Deepti Nehra, MS Thesis, QM/MM study of the radical reaction mechanism in a human gut microbiota enzyme: the specific case of Choline trimethylamine-lyase, July 2024
- Joel M. Bascuas, MS Thesis, Unveiling the full 3D structure of α2β2γ1 AMPK complex: towards the understanding of allosteric mechanism, July 2023
- Mireia Gómez-Gordo, MS Thesis, Towards the understanding of the Structure-Action Relationship of CutC as a relevant target for the treatment of Cardiovascular Diseases, July 2023
- Fajar R. Puteras, MS Thesis, Determining the conformational plasticity of Choline trimethylamine-lyase from Klebsiella pneumoniae, September 2023
- Katerina Barmpidi, MS Thesis, Structural basis of the selective direct activation mechanism of AMPK: isoform dependent complexes, July 2022
- Alessia Forte, MS Thesis, Investigating the mechanism of AMPK activators: computational approach to the understanding of the molecular basis of selectivity toward AMPK isoforms, November 2020.
- Emanuele Fara, MS Thesis, Computational studies about the allosteric mechanism of AMPK, March 2017
Available positions
We are looking for motivated and talented students from Chemistry, Physics, Pharmacy, Food Science or related degrees to join our group. New members can join the group at the undergraduate (Master), doctorate (Ph.D.) and postdoctoral levels to work in one of the topics explained in Research page. (and put link to the page directly)
If available, we can cover the salary of Master and PhD students from one of our research projects.
Else, we are always happy to support different Spanish and Catalan grants that potential PhD students and postdocs can apply to join our group:
- PRE-DOC fellowships for PhD students(University of Barcelona)
- FI fellowships for PhD students(Catalan Government)
- FPU fellowships for PhD students(Spanish Government)
- Beatriu de Pinós fellowships for postdoctoral researchers(Catalan Government)
- JdC fellowships(Spanish Government)
- Maria Zambrano and Margarita Salas Fellowships (Spanish Government)
- MSCA-IF Marie Skłodowska-Curie Actions – Individual fellowships for postdoctoral researchers (European Union)
Also, we are always happy to consider hosting visiting professors.
Please contact us if you are interested, we can help you in your application so that you can get funding to join our group:
Carolina Estarellas
Email: cestarellas(at)ub.edu








