VVV Vini, Vidi, Vinci
Our in house software platform to develop and implement old and new algorithms for Structure-Based Drug Design studies:
Dock_Dyn : A program for molecular docking based on dynamic information
Gen_Desc : A program to generate different descriptors
Gen_QSAR: A program to perform QSAR analysis
Gen_Conf : A program to generate molecular conformations and to analyse pharmacophores
Fuzzy_CMeans : Clustering using the Fuzzy c-means algorithm and different modifications
Anal_SimDis : A program to compare different Distances and Similarities
Quimio_Gen : A Quimiogenomics analysis of Data
Virtual_Screening : A program for Virtual Screening
fdGaMD
Fragment dissolved molecular dynamics: a systematic and efficient method to locate binding sites.