Publications
Group Members
News
Contact us
Software
User login
Username:
*
Password:
*
Request new password
Recent blog posts
Group Seminar and Journal Club 2017 - NEW!
Group Seminar and Journal Club 2016 - NEW!
Group Seminars and Journal Clubs - 2016
Installing PyMol from MacPorts
How to calculate ROC curves
MIPGen
Small Molecule Dihedrals Parametrization
Gaussian 09 and Antechamber12
Organic solvent boxes
Parametrize new ligands for AMBER and CHARMM
more
Home
›
Publications
Publications
List
Filter
Export 256 results:
Tagged
XML
BibTex
Sort by:
Author
Title
[
Type
]
Year
Journal Article
Andrews, DL
,
Curutchet C
,
Scholes GD
. 2011.
Resonance energy transfer: Beyond the limits
.
Laser & Photonics Reviews. 5(1):114-123.
Abstract
Tagged
XML
BibTex
Google Scholar
Bikiel, DE
,
Forti F
,
Boechi L
,
Nardini M
,
Luque FJ
,
Marti MA
,
Estrin DA
. 2010.
Role of heme distortion on oxygen affinity in heme proteins: the protoglobin case
.
The journal of physical chemistry.B. 114(25):8536-8543.
Abstract
Tagged
XML
BibTex
Google Scholar
Oliveira, A
,
Singh S
,
Bidon-Chanal A
,
Forti F
,
Marti MA
,
Boechi L
,
Estrin DA
,
Dikshit KL
,
Luque FJ
. 2012.
Role of PheE15 Gate in Ligand Entry and Nitric Oxide Detoxification Function of Mycobacterium tuberculosis Truncated Hemoglobin N
.
PLoS ONE. 7
Tagged
XML
BibTex
Google Scholar
Lama, A
,
Pawaria S
,
Bidon-Chanal A
,
Anand A
,
Gelpi JL
,
Arya S
,
Marti M
,
Estrin DA
,
Luque FJ
,
Dikshit KL
. 2009.
Role of Pre-A motif in nitric oxide scavenging by truncated hemoglobin, HbN, of Mycobacterium tuberculosis
.
The Journal of biological chemistry. 284(21):14457-14468.
Abstract
Tagged
XML
BibTex
Google Scholar
Marco, E
,
Negri A
,
Luque FJ
,
Gago F
. 2005.
Role of stacking interactions in the binding sequence preferences of DNA bis-intercalators: insight from thermodynamic integration free energy simulations
.
Nucleic acids research. 33(19):6214-6224.
Abstract
Tagged
XML
BibTex
Google Scholar
Soliva, R
,
Luque FJ
,
Alhambra C
,
Orozco M
. 1999.
Role of sugar re-puckering in the transition of A and B forms of DNA in solution. A molecular dynamics study
.
Journal of Biomolecular Structure & Dynamics. 17(1):89-99.
Abstract
Tagged
XML
BibTex
Google Scholar
Hernandez, B
,
Orozco M
,
Luque FJ
. 1997.
Role of tautomerism of 2-azaadenine and 2-azahypoxanthine in substrate recognition by xanthine oxidase
.
Journal of computer-aided molecular design. 11(2):153-162.
Abstract
Tagged
XML
BibTex
Google Scholar
Manez, AP
,
Lu C
,
Boechi L
,
Marti MA
,
Shepherd M
,
Wilson JL
,
Poole RK
,
Luque FJ
,
Yeh SR
,
Estrin DA
. 2011.
Role of the distal hydrogen-bonding network in regulating oxygen affinity in the truncated hemoglobin III from Campylobacter jejuni
.
Biochemistry. 50(19):3946-3956.
Abstract
Tagged
XML
BibTex
Google Scholar
Mennucci, B
,
Curutchet C
. 2011.
The role of the environment in electronic energy transfer: a molecular modeling perspective
.
Physical Chemistry Chemical Physics. 13(24):11538-11550.
Abstract
Tagged
XML
BibTex
Google Scholar
Barril, X
,
Aleman C
,
Orozco M
,
Luque FJ
. 1998.
Salt bridge interactions: stability of the ionic and neutral complexes in the gas phase, in solution, and in proteins
.
Proteins. 32(1):67-79.
Abstract
Tagged
XML
BibTex
Google Scholar
Martinez, A
,
Alonso M
,
Castro A
,
Dorronsoro I
,
Gelpi JL
,
Luque FJ
,
Perez C
,
Moreno FJ
. 2005.
SAR and 3D-QSAR studies on thiadiazolidinone derivatives: exploration of structural requirements for glycogen synthase kinase 3 inhibitors
.
Journal of medicinal chemistry. 48(23):7103-7112.
Abstract
Tagged
XML
BibTex
Google Scholar
Curutchet, C
,
Cammi R
,
Mennucci B
,
Corni S
. 2006.
Self-consistent quantum mechanical model for the description of excitation energy transfers in molecules at interfaces
.
Journal of Chemical Physics. 125(5)
Abstract
Tagged
XML
BibTex
Google Scholar
Hennebicq, E
,
Beljonne D
,
Curutchet C
,
Scholes GD
,
Silbey RJ
. 2009.
Shared-mode assisted resonant energy transfer in the weak coupling regime
.
Journal of Chemical Physics. 130(21)
Abstract
Tagged
XML
BibTex
Google Scholar
Schmidtke, P
,
Luque FJ
,
Murray JB
,
Barril X
. 2011.
Shielded Hydrogen Bonds as Structural Determinants of Binding Kinetics: Application in Drug Design
.
Journal of the American Chemical Society.
Abstract
Tagged
XML
BibTex
Google Scholar
Perez-Areales, FJ
,
Di Pietro O
,
Espargaro A
,
Vallverdu-Queralt A
,
Galdeano C
,
Ragusa IM
,
Viayna E
,
Guillou C
,
Clos MV
,
B P
et al.
. 2014.
Shogaol-huprine hybrids: Dual antioxidant and anticholinesterase agents with β-amyloid and tau anti-aggregating properties
.
Bioorganic Medicinal Chemistry. 22
Tagged
XML
BibTex
Google Scholar
Curutchet, C
,
Orozco M
,
Luque FJ
. 2001.
Solvation in octanol: Parametrization of the continuum MST model
.
Journal of Computational Chemistry. 22(11):1180-1193.
Abstract
Tagged
XML
BibTex
Google Scholar
Viani, L
,
Curutchet C
,
Mennucci B
. 2013.
Spatial and Electronic Correlations in the PE545 Light-Harvesting Complex
.
Journal of Physical Chemistry Letters. 4(3):372-377.
Abstract
Tagged
XML
BibTex
Google Scholar
Girona, V
,
Pacareu C
,
Riera A
,
Pouplana R
,
Castillo M
,
Bolos J
. 1988.
Spectrophotometric determination of the stability of an ampicillin-dicloxacillin suspension
.
Journal of pharmaceutical and biomedical analysis. 6(1):23-28.
Abstract
Tagged
XML
BibTex
Google Scholar
Spyrakis, F
,
Luque FJ
,
Viappiani C
. 2011.
Structural analysis in nonsymbiotic hemoglobins: what can we learn from inner cavities?
Plant science : an international journal of experimental plant biology. 181(1):8-13.
Abstract
Tagged
XML
BibTex
Google Scholar
Pouplana, R
,
Perez C
,
Sanchez J
,
Lozano JJ
,
Puig-Parellada P
. 1999.
The structural and electronical factors that contribute affinity for the time-dependent inhibition of PGHS-1 by indomethacin, diclofenac and fenamates
.
Journal of computer-aided molecular design. 13(3):297-313.
Abstract
Tagged
XML
BibTex
Google Scholar
Boechi, L
,
Marti MA
,
Milani M
,
Bolognesi M
,
Luque FJ
,
Estrin DA
. 2008.
Structural determinants of ligand migration in Mycobacterium tuberculosis truncated hemoglobin O
.
Proteins. 73(2):372-379.
Abstract
Tagged
XML
BibTex
Google Scholar
Galdeano, C
,
Viayna E
,
Arroyo P
,
Bidon-Chanal A
,
Blas JR
,
Munoz-Torrero D
,
Luque FJ
. 2010.
Structural determinants of the multifunctional profile of dual binding site acetylcholinesterase inhibitors as anti-Alzheimer agents
.
Current pharmaceutical design. 16(25):2818-2836.
Abstract
Tagged
XML
BibTex
Google Scholar
Correale, S
,
de Paola I
,
Morgillo CM
,
Federico A
,
Zaccaro L
,
P P
,
Galeone A
,
Fusco A
,
Pedone E
,
Luque FJ
et al.
. 2014.
Structural model of the hUbA1-UbcH10 quaternary complex: In silicoand experimental analysis of the protein-protein interactions between E1, E2 and ubiquitin
.
Plos One. 9
Tagged
XML
BibTex
Google Scholar
Faggiano, S
,
Abbruzzetti S
,
Spyrakis F
,
Grandi E
,
Viappiani C
,
Bruno S
,
Mozzarelli A
,
Cozzini P
,
Astegno A
,
Dominici P
et al.
. 2009.
Structural plasticity and functional implications of internal cavities in distal mutants of type 1 non-symbiotic hemoglobin AHb1 from Arabidopsis thaliana
.
The journal of physical chemistry.B. 113(49):16028-16038.
Abstract
Tagged
XML
BibTex
Google Scholar
Blas, JR
,
Huertas O
,
Tabares C
,
Sumpter BG
,
Fuentes-Cabrera M
,
Orozco M
,
Ordejon P
,
Luque FJ
. 2011.
Structural, dynamical, and electronic transport properties of modified DNA duplexes containing size-expanded nucleobases
.
The journal of physical chemistry.A. 115(41):11344-11354.
Abstract
Tagged
XML
BibTex
Google Scholar
« first
‹ previous
…
3
4
5
6
7
8
9
10
11
next ›
last »